WhatsHap is a software for phasing genomic variants using DNA sequencing reads, also called read-based phasing or haplotype assembly. It is especially suitable for long reads, but works also well with short reads. ---
The WhatsHap module parses results generated by
WhatsHap, and is currently restricted to the
whatshap stats --tsv.
File search patterns
whatshap/stats: contents: "#sample\tchromosome\tfile_name\tvariants\tphased\tunphased\tsingletons" num_lines: 1