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TopHat

Supported Tool

TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes.

Description

The TopHat module parses results generated by TopHat, a fast splice junction mapper for RNA-Seq reads that aligns RNA-Seq reads to mammalian-sized genomes.

File search patterns

tophat:
  fn: "*align_summary.txt"
  shared: true