PURPLE
Supported Tool
A purity, ploidy and copy number estimator for whole genome tumor data
Description
Purple combines B-allele frequency (BAF), read depth ratios, somatic variants and structural variant breakpoints to estimate the purity and copy number profile of a tumor sample, and also predicts gender, the MSI status, tumor mutational load and burden, clonality and the whole genome duplication status.
File search patterns
purple/qc:
fn: "*.purple.qc"
purple/purity:
fn: "*.purple.purity.tsv"