finds information about sequencing libraries by backwards computing sequencing data.
ngsderive is a forensic analysis tool useful in backwards computing information from next-generation sequencing data. Notably, results are provided as a ‘best guess’ — the tool does not claim 100% accuracy and results should be considered with that understanding.
Please see the documentation for more information.
File search patterns
ngsderive/strandedness: contents: File TotalReads ForwardPct ReversePct Predicted num_lines: 1 ngsderive/instrument: contents: File Instrument Confidence Basis num_lines: 1 ngsderive/readlen: contents: File Evidence MajorityPctDetected ConsensusReadLength num_lines: 1 ngsderive/encoding: contents: File Evidence ProbableEncoding num_lines: 1 ngsderive/junction_annotation: contents: File total_junctions total_splice_events known_junctions partial_novel_junctions complete_novel_junctions known_spliced_reads partial_novel_spliced_reads complete_novel_spliced_reads num_lines: 1