ngsderive
Supported Tool
finds information about sequencing libraries by backwards computing sequencing data.
Description
ngsderive is a forensic analysis tool useful in backwards computing information from next-generation sequencing data. Notably, results are provided as a ‘best guess’ — the tool does not claim 100% accuracy and results should be considered with that understanding.
Please see the documentation for more information.
File search patterns
ngsderive/strandedness:
contents: File TotalReads ForwardPct ReversePct Predicted
num_lines: 1
ngsderive/instrument:
contents: File Instrument Confidence Basis
num_lines: 1
ngsderive/readlen:
contents: File Evidence MajorityPctDetected ConsensusReadLength
num_lines: 1
ngsderive/encoding:
contents: File Evidence ProbableEncoding
num_lines: 1
ngsderive/junction_annotation:
contents: File total_junctions total_splice_events known_junctions partial_novel_junctions complete_novel_junctions known_spliced_reads partial_novel_spliced_reads complete_novel_spliced_reads
num_lines: 1