NanoStat
Supported Tool
Reports various statistics for long read dataset in FASTQ, BAM, or albacore sequencing summary format (supports NanoPack; NanoPlot, NanoComp)
Programs are part of the NanoPack family for summarising results of sequencing on Oxford Nanopore methods (MinION, PromethION etc.)
File search patterns
nanostat:
contents_re: Metrics\s+dataset\s*
max_filesize: 4096
num_lines: 1
nanostat/legacy:
contents_re: General summary:\s*
max_filesize: 4096
num_lines: 1