NanoStat
Supported Tool
Calculate various statistics from a long read sequencing dataset in fastq, bam or albacore sequencing summary format.
Description
The nanostat module parses text output generated by NanoStat, a program for summarising results of sequencing on Oxford Nanopore methods (MinION, PromethION etc.)
File search patterns
nanostat:
max_filesize: 4096
contents_re: General summary:\s*
num_lines: 1