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Supported Tool

Command line tool to annotate miRNAs with a standard mirna/isomir naming


This tool is dedicated to the creation and management of miRNA alignment output using the standardized GFF3 format ( A unified miRNA alignment format allows to easily compare the output of different alignement tools.

Currently, mirtop can convert into mirGFF3 the outputs of commonly used pipelines, such as seqbuster, isomiR-SEA, sRNAbench, Prost! as well as BAM files.

File search patterns

  fn: "*_mirtop_stats.log"