MEGAN alignment tool
MALT performs alignment of metagenomic reads against a database of reference sequences (such as NR, GenBank or Silva) and produces a MEGAN RMA file as output.
The MALT MultiQC module reads the header of the MALT log files and procudes three MultiQC sections:
- A MALT summary statistics table
- A Mappability bargraph
- A Taxonomic assignment success bargraph
File search patterns
malt: contents: MaltRun - Aligns sequences using MALT (MEGAN alignment tool) num_lines: 2