Bowtie 1

Description

The Bowtie 1 module parses results generated by Bowtie, an ultrafast, memory-efficient short read aligner.

File search patterns

bowtie1:
  contents: "# reads processed:"
  exclude_fn:
    - bowtie.left_kept_reads.log
    - bowtie.left_kept_reads.m2g_um.log
    - bowtie.left_kept_reads.m2g_um_seg1.log
    - bowtie.left_kept_reads.m2g_um_seg2.log
    - bowtie.right_kept_reads.log
    - bowtie.right_kept_reads.m2g_um.log
    - bowtie.right_kept_reads.m2g_um_seg1.log
    - bowtie.right_kept_reads.m2g_um_seg2.log
  shared: true